AI & ML interests

We aim to unify the schema across many different biomedical NLP resources.

Recent Activity

Locutusque 
posted an update 6 days ago
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🚀 Introducing Esmeralda-Llama-3.1-8B-control
The first release in the Esmeralda model family by Locutusque.

This model is intentionally small and experimental — a control/baseline proof-of-concept designed to answer one question:

«“How strong is my new "Locutusque/esmeralda-agentic" dataset before scaling to larger runs?”»

Training Details

- Base: Llama 3.1 8B
- Training precision: bf16 mixed precision
- Chat template: modified ChatML
- Dataset size: ~37k examples
- Examples actually used for this run: ~5k

The dataset includes:

- multi-turn agentic traces
- reasoning traces
- structured assistant behavior
- generalist instruction data

Benchmark Results

Compared against:

- Llama 3.1 8B Instruct
- Hermes-3-Llama-3.1-8B

HumanEval

57.3 — Esmeralda
56.1 — Llama 3.1 Instruct
52.4 — Hermes-3

MBPP

53.2 — Esmeralda
56.8 — Llama 3.1 Instruct
48.2 — Hermes-3

GPQA Diamond

15.7 — Esmeralda
15.7 — Llama 3.1 Instruct
18.2 — Hermes-3

EQ-Bench

59.2 — Esmeralda
61.1 — Llama 3.1 Instruct
63.1 — Hermes-3

EQ-Bench Parseable (Syntax Stability)

🔥 100.0% — Esmeralda
92.4% — Llama 3.1 Instruct
91.2% — Hermes-3

Here Be Dragons 🐉

I also experimented with a new TruthfulQA free-generation evaluation setup.

- Responses were judged by Gemma 4 26B A4B
- The judge compared generations directly against ground-truth answers
- Models were evaluated in 8-bit quantized form to speed up inference

TruthfulQA (LLM Judge)

0.682 — Esmeralda-Llama-3.1-8B-control
0.587 — Hermes-3-Llama-3.1-8B (reported MC2 score; methodology differs)

For a lightweight control run trained on only a fraction of the dataset, I’m pretty encouraged by the results.

The model is released under the standard Llama 3.1 license, and I’d genuinely love feedback from people testing it in real workflows.

Model: Locutusque/Esmeralda-Llama-3.1-8B-control

Dataset: Locutusque/esmeralda-agentic

Tonic 
posted an update 17 days ago
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🙋🏻‍♂️ Hey there folks ,

Turns out : if we predict 🌏 earth we can save a lot of time looking for interesting things and less time looking at things that we expect to see.

Sentinel-2 imagery 🛰️basically takes a long time to download towards earth. so our "near real time" systems are quite far from that in practical terms.

meanwhile , if we "predict" what we will see , based on what we do see , we can send down much less data in a timely way , and prioritize 📡earth-bound response .

I'm talking about illegal fishing , logging , mining or building in nature reserves , the more of that we predict early the more we're able to stop it on time.

At least that's the concept !

check out the blog : https://huggingface.co/blog/Tonic/save-patagonia-by-predicting-earth


- Collection: https://huggingface.co/collections/NuTonic/earth-observation-with-temporal-and-general-understanding
- Code: https://github.com/Josephrp/Nutonic
- Dataset: NuTonic/sat-vl-sft-training-ready-v1
- Model: NuTonic/lspace
- Training: NuTonic/lspace-trackio
- Evals: NuTonic/Patagonia_Eval
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Tonic 
posted an update about 1 month ago
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🙋🏻‍♂️ Hey there folks,

since everyone liked my previous announcement post ( https://huggingface.co/posts/Tonic/338509028435394 ) so much , i'm back with more high quality proceedural datasets in the Geospacial domain for SFT training !

Check this one out :
NuTonic/sat-bbox-metadata-sft-v1

the goal is to be able to train vision models on multiple images for remote sensing analysis with one shot .

hope you like it ! 🚀
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Tonic 
posted an update about 1 month ago
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🙋🏻‍♂️ Hey there folks ,

I'm sharing huggingface's largest dataset of annotated statelite images today.

check it out here : NuTonic/sat-image-boundingbox-sft-full

I hope you like it , the idea is to be able to use this with small vision models 🚀
MaziyarPanahi 
posted an update 2 months ago
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Training mRNA Language Models Across 25 Species for $165

We built an end-to-end protein AI pipeline covering structure prediction, sequence design, and codon optimization. After comparing multiple transformer architectures for codon-level language modeling, CodonRoBERTa-large-v2 emerged as the clear winner with a perplexity of 4.10 and a Spearman CAI correlation of 0.40, significantly outperforming ModernBERT. We then scaled to 25 species, trained 4 production models in 55 GPU-hours, and built a species-conditioned system that no other open-source project offers. Complete results, architectural decisions, and runnable code below.

https://huggingface.co/blog/OpenMed/training-mrna-models-25-species
MaziyarPanahi 
posted an update 2 months ago
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We annotated 119K medical images with two frontier VLMs (Qwen 3.5, Kimi K2.5), cross-validated at 93% agreement, and produced 110K training records, all for under $500. Fine-tuning 3 small models (2-3B params) improved all benchmarks: best model reaches +15.0% average exact match.

Everything is open-sourced: datasets, adapters, and code.

https://huggingface.co/blog/OpenMed/synthvision
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Nymbo 
posted an update 3 months ago
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We should really have a release date range slider on the /models page. Tired of "trending/most downloaded" being the best way to sort and still seeing models from 2023 on the first page just because they're embedded in enterprise pipelines and get downloaded repeatedly. "Recently Created/Recently Updated" don't solve the discovery problem considering the amount of noise to sift through.

Slight caveat: Trending actually does have some recency bias, but it's not strong/precise enough.
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MaziyarPanahi 
posted an update 3 months ago
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DNA, mRNA, proteins, AI. I spent the last year going deep into computational biology as an ML engineer. This is Part I of what I found. 🧬

In 2024, AlphaFold won the Nobel Prize in Chemistry.

By 2026, the open-source community had built alternatives that outperform it.

That's the story I find most interesting about protein AI right now. Not just the science (which is incredible), but the speed at which open-source caught up. Multiple teams, independently, reproduced and then exceeded AlphaFold 3's accuracy with permissive licenses. The field went from prediction to generation: we're not just modeling known proteins anymore, we're designing new ones.

I spent months mapping this landscape for ML engineers. What the architectures actually are (spoiler: transformers and diffusion models), which tools to use for what, and which ones you can actually ship commercially.

New post on the Hugging Face blog: https://huggingface.co/blog/MaziyarPanahi/protein-ai-landscape

Hope you all enjoy! 🤗
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albertvillanova 
posted an update 3 months ago
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🚀 TRL v0.29.0 introduces trl-training: an agent-native training skill.

This makes the TRL CLI a structured, agent-readable capability, allowing AI agents to reliably execute training workflows such as:
- Supervised Fine-Tuning (SFT)
- Direct Preference Optimization (DPO)
- Group Relative Policy Optimization (GRPO)

We’re excited to see what the community builds on top of this.

If you’re working on AI agents, alignment research, or scalable RL training infrastructure: give TRL v0.29.0 a try! 🤗

The future of ML tooling is agent-native.
🔗 https://github.com/huggingface/trl/releases/tag/v0.29.0
Tonic 
posted an update 3 months ago
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🤔 Who would win ?

- a fully subsidized ai lab
OR
- 3 random students named
kurakurai
?

demo : Tonic/fr-on-device

if you like it give the demo a little star and send a shoutout to : @MaxLSB @jddqd and @GAD-cell for absolutely obliterating the pareto frontier of the french language understanding .
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Tonic 
posted an update 3 months ago
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🙋🏻‍♂️hello my lovelies ,

it is with great pleasure i present to you my working one-click deploy 16GB ram completely free huggingface spaces deployment.

repo : Tonic/hugging-claw (use git clone to inspect)
literally the one-click link : Tonic/hugging-claw

you can also run it locally and see for yourself :

docker run -it -p 7860:7860 --platform=linux/amd64 \
-e HF_TOKEN="YOUR_VALUE_HERE" \
-e OPENCLAW_GATEWAY_TRUSTED_PROXIES="YOUR_VALUE_HERE" \
-e OPENCLAW_GATEWAY_PASSWORD="YOUR_VALUE_HERE" \
-e OPENCLAW_CONTROL_UI_ALLOWED_ORIGINS="YOUR_VALUE_HERE" \
registry.hf.space/tonic-hugging-claw:latest


just a few quite minor details i'll take care of but i wanted to share here first
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albertvillanova 
posted an update 4 months ago
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5 years already working in democratizing AI 🤗
Grateful to be part of such an awesome team making it happen every day.
MaziyarPanahi 
posted an update 4 months ago
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Announcing: OpenMed Multilingual PII Detection Models

Today I am releasing 105 open-source models for Personally Identifiable Information (PII) detection in French, German, and Italian.

All Apache 2.0 licensed. Free for commercial use. No restrictions.

Performance:

- French: 97.97% F1 (top model)
- German: 97.61% F1 (top model)
- Italian: 97.28% F1 (top model)

All top-10 models per language exceed 96% F1

Coverage:

55+ PII entity types per language
Native ID formats: NSS (French), Sozialversicherungsnummer (German), Codice Fiscale (Italian)
Language-specific address, phone, and name patterns

Training Data:

French: 49,580 samples
German: 42,250 samples
Italian: 40,944 samples

Why Multilingual?

European healthcare operates in European languages. Clinical notes, patient records, and medical documents are generated in French, German, Italian, and other languages.

Effective de-identification requires:

- Native language understanding — not translation
- Local ID format recognition — each country has unique patterns
- Cultural context awareness — names, addresses, and formats vary
- These models deliver production-ready accuracy without requiring data to leave your infrastructure or language.

HIPAA & GDPR Compliance
Built for US and European privacy regulations:

- On-premise deployment: Process data locally with zero external dependencies
- Data sovereignty: No API calls, no cloud services, no cross-border transfers
- Air-gapped capable: Deploy in fully isolated environments if required
- Regulatory-grade accuracy: Supporting Expert Determination standards
- HIPAA and GDPR compliance across languages, without compliance gaps.

Use Cases
- Hospital EHR systems: Automated patient record de-identification
- Clinical research: Multilingual dataset preparation for studies
- Insurance companies: Claims processing across

https://huggingface.co/collections/OpenMed/multilingual-pii-and-de-identification
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